Package: evola 1.0.5

evola: Evolutionary Algorithm

Runs a genetic algorithm using the 'AlphaSimR' machinery <doi:10.1093/g3journal/jkaa017> and the coalescent simulator 'MaCS' <doi:10.1101/gr.083634.108>.

Authors:Giovanny Covarrubias-Pazaran [aut, cre]

evola_1.0.5.tar.gz
evola_1.0.5.zip(r-4.5)evola_1.0.5.zip(r-4.4)evola_1.0.5.zip(r-4.3)
evola_1.0.5.tgz(r-4.5-any)evola_1.0.5.tgz(r-4.4-any)evola_1.0.5.tgz(r-4.3-any)
evola_1.0.5.tar.gz(r-4.5-noble)evola_1.0.5.tar.gz(r-4.4-noble)
evola_1.0.5.tgz(r-4.4-emscripten)evola_1.0.5.tgz(r-4.3-emscripten)
evola.pdf |evola.html
evola/json (API)

# Install 'evola' in R:
install.packages('evola', repos = c('https://covaruber.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/covaruber/evola/issues

Datasets:
  • A - Genotypic and Phenotypic data for a CP population
  • A_wheat - Wheat lines dataset
  • DT_cpdata - Genotypic and Phenotypic data for a CP population
  • DT_technow - Genotypic and Phenotypic data from single cross hybrids
  • DT_wheat - Wheat lines dataset
  • GT_wheat - Wheat lines dataset
  • M_technow - Genotypic and Phenotypic data from single cross hybrids

On CRAN:

Conda:

4.20 score 1 stars 3 scripts 247 downloads 16 exports 10 dependencies

Last updated 17 hours agofrom:865b18d485. Checks:1 OK, 8 ERROR. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 08 2025
R-4.5-winERRORMar 08 2025
R-4.5-macERRORMar 08 2025
R-4.5-linuxERRORMar 08 2025
R-4.4-winERRORMar 08 2025
R-4.4-macERRORMar 08 2025
R-4.4-linuxERRORMar 08 2025
R-4.3-winERRORMar 08 2025
R-4.3-macERRORMar 08 2025

Exports:A.matbestSolevolafitimportHaploSparseinbFunJcJrnQtlocsFunoverlayparetopmonitorregFunstanupdate.evolaFitModvarQ

Dependencies:AlphaSimRBHcrayonlatticeMatrixR6rbibutilsRcppRcppArmadilloRdpack

Genetic algorithm using the evola package

Rendered fromevola_intro.Rmdusingknitr::rmarkdownon Mar 08 2025.

Last update: 2025-03-08
Started: 2025-01-18